Package sc.fiji.snt.analysis

Class PeripathDetector

java.lang.Object

sc.fiji.snt.analysis.PeripathDetector

@Deprecated
public class PeripathDetector
extends Object

Deprecated.

Use PeripathDetector instead. This class is retained for backward compatibility and delegates all calls to the new package.

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static final class	PeripathDetector.Config	Deprecated. Use PeripathDetector.Config instead.
static final class	PeripathDetector.Detection	Deprecated. Use Detection instead.

Method Summary

Modifier and Type	Method	Description
static void	createTorusMask(Collection<Path> paths, ij.ImagePlus output, PeripathDetector.Config cfg, double fillValue)	Deprecated. Use PeripathDetector.createTorusMask(java.util.Collection<sc.fiji.snt.Path>, net.imglib2.RandomAccessibleInterval<T>, sc.fiji.snt.analysis.detection.PeripathDetector.Config, double) instead.
static <T extends net.imglib2.type.numeric.RealType<T>> void	createTorusMask(Collection<Path> paths, net.imglib2.RandomAccessibleInterval<T> output, PeripathDetector.Config cfg, double fillValue)	Deprecated. Use PeripathDetector.createTorusMask(java.util.Collection<sc.fiji.snt.Path>, net.imglib2.RandomAccessibleInterval<T>, sc.fiji.snt.analysis.detection.PeripathDetector.Config, double) instead.
static <T extends net.imglib2.type.numeric.RealType<T>> List<Detection>	detect(Collection<Path> paths, net.imglib2.RandomAccessibleInterval<? extends net.imglib2.type.numeric.RealType<?>> img, PeripathDetector.Config cfg)	Deprecated. Use PeripathDetector.detect(java.util.Collection<sc.fiji.snt.Path>, net.imglib2.RandomAccessibleInterval<? extends net.imglib2.type.numeric.RealType<?>>, sc.fiji.snt.analysis.detection.PeripathDetector.Config) instead.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Details

detect

@Deprecated
public static <T extends net.imglib2.type.numeric.RealType<T>>
List<Detection> detect(Collection<Path> paths,
 net.imglib2.RandomAccessibleInterval<? extends net.imglib2.type.numeric.RealType<?>> img,
 PeripathDetector.Config cfg)

Deprecated.

Use PeripathDetector.detect(java.util.Collection<sc.fiji.snt.Path>, net.imglib2.RandomAccessibleInterval<? extends net.imglib2.type.numeric.RealType<?>>, sc.fiji.snt.analysis.detection.PeripathDetector.Config) instead.

createTorusMask

@Deprecated
public static <T extends net.imglib2.type.numeric.RealType<T>>
void createTorusMask(Collection<Path> paths,
 net.imglib2.RandomAccessibleInterval<T> output,
 PeripathDetector.Config cfg,
 double fillValue)

Deprecated.

Use PeripathDetector.createTorusMask(java.util.Collection<sc.fiji.snt.Path>, net.imglib2.RandomAccessibleInterval<T>, sc.fiji.snt.analysis.detection.PeripathDetector.Config, double) instead.

createTorusMask

@Deprecated
public static void createTorusMask(Collection<Path> paths,
 ij.ImagePlus output,
 PeripathDetector.Config cfg,
 double fillValue)

Deprecated.

Use PeripathDetector.createTorusMask(java.util.Collection<sc.fiji.snt.Path>, net.imglib2.RandomAccessibleInterval<T>, sc.fiji.snt.analysis.detection.PeripathDetector.Config, double) instead.