Package sc.fiji.snt.gui

Class OntologyBrowser.OntologyTab

java.lang.Object

java.awt.Component

java.awt.Container

javax.swing.JComponent

javax.swing.JPanel

sc.fiji.snt.gui.OntologyBrowser.OntologyTab

All Implemented Interfaces:

ImageObserver, MenuContainer, Serializable, Accessible

Enclosing class:

OntologyBrowser

public class OntologyBrowser.OntologyTab
extends JPanel

Represents a single ontology tab containing a searchable checkbox tree. Provides methods for customizing the tree's appearance and behavior.

See Also:

• Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class javax.swing.JPanel

JPanel.AccessibleJPanel

Nested classes/interfaces inherited from class javax.swing.JComponent

JComponent.AccessibleJComponent

Nested classes/interfaces inherited from class java.awt.Container

Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy

Field Summary

Fields inherited from class javax.swing.JComponent

listenerList, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW

Fields inherited from class java.awt.Component

accessibleContext, BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Method Summary

Modifier and Type	Method	Description
JPopupMenu	createDefaultPopupMenu()	Creates the default popup menu with generic tree navigation actions: Deselect All, Uncheck All, Collapse/Expand All, Collapse/Expand Selected Level, and Auto-select Children toggle.
void	expandToLevel(int level)	Expands the tree to the given depth level.
DefaultMutableTreeNode	findNode(String label)	Finds a node by matching its user object's toString() against the given label (depth-first search).
SNTSearchableBar	getSearchableBar()	Returns the search bar for additional configuration.
com.jidesoft.swing.CheckBoxTree	getTree()	Returns the underlying checkbox tree.
void	repaintTree()	Triggers a repaint on the tree (e.g., after external state changes that affect the cell renderer).
void	setBottomPanel(JPanel panel)	Adds a bottom panel (e.g., buttons) below the tree.
void	setCellRenderer(TreeCellRenderer renderer)	Sets a custom cell renderer for the tree.
void	setCheckBoxEnabledPredicate(Predicate<Object> predicate)	Sets a predicate that controls which nodes have enabled checkboxes.
void	setCheckboxSelected(String nodeLabel, boolean selected)	Programmatically checks the node whose user object's toString() matches the given label.
void	setDigIn(boolean digIn)	Sets whether checking a parent automatically checks all children.
void	setPopupMenu(JPopupMenu popupMenu)	Sets a popup menu on the tree.
void	setRootVisible(boolean visible)	Sets whether the root node is visible.
void	setStatusLabelPlaceholder(String text)	Sets the status label placeholder text on the search bar.

Methods inherited from class javax.swing.JPanel

getAccessibleContext, getUI, getUIClassID, paramString, setUI, updateUI

Methods inherited from class javax.swing.JComponent

addAncestorListener, addNotify, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBaseline, getBaselineResizeBehavior, getBorder, getBounds, getClientProperty, getComponentGraphics, getComponentPopupMenu, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getFontMetrics, getGraphics, getHeight, getInheritsPopupMenu, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPopupLocation, getPreferredSize, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, hide, isDoubleBuffered, isLightweightComponent, isManagingFocus, isOpaque, isOptimizedDrawingEnabled, isPaintingForPrint, isPaintingOrigin, isPaintingTile, isRequestFocusEnabled, isValidateRoot, paint, paintBorder, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setComponentPopupMenu, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFocusTraversalKeys, setFont, setForeground, setInheritsPopupMenu, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, getMousePosition, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setLayout, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocusInWindow, resize, resize, setBounds, setBounds, setComponentOrientation, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setMixingCutoutShape, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Method Details

setCellRenderer

public void setCellRenderer(TreeCellRenderer renderer)

Sets a custom cell renderer for the tree.

Parameters:

renderer - the cell renderer

setCheckBoxEnabledPredicate

public void setCheckBoxEnabledPredicate(Predicate<Object> predicate)

Sets a predicate that controls which nodes have enabled checkboxes. Nodes for which the predicate returns false will have their checkboxes disabled (grayed out, non-clickable).

Parameters:

predicate - a predicate tested against each node's user object; return true to enable the checkbox

setPopupMenu

public void setPopupMenu(JPopupMenu popupMenu)

Sets a popup menu on the tree.

Parameters:

popupMenu - the popup menu

setStatusLabelPlaceholder

public void setStatusLabelPlaceholder(String text)

Sets the status label placeholder text on the search bar.

Parameters:

text - the placeholder text (e.g., "CCF v3.1")

getSearchableBar

public SNTSearchableBar getSearchableBar()

Returns the search bar for additional configuration.

Returns:

the searchable bar

getTree

public com.jidesoft.swing.CheckBoxTree getTree()

Returns the underlying checkbox tree.

Returns:

the checkbox tree

setRootVisible

public void setRootVisible(boolean visible)

Sets whether the root node is visible.

Parameters:

visible - true to show the root

setDigIn

public void setDigIn(boolean digIn)

Sets whether checking a parent automatically checks all children.

Parameters:

digIn - true to enable dig-in selection

expandToLevel

public void expandToLevel(int level)

Expands the tree to the given depth level.

Parameters:

level - the depth to expand to

setBottomPanel

public void setBottomPanel(JPanel panel)

Adds a bottom panel (e.g., buttons) below the tree.

Parameters:

panel - the panel to add

setCheckboxSelected

public void setCheckboxSelected(String nodeLabel,
 boolean selected)

Programmatically checks the node whose user object's toString() matches the given label.

Parameters:

nodeLabel - the label to match

selected - true to check, false to uncheck

findNode

public DefaultMutableTreeNode findNode(String label)

Finds a node by matching its user object's toString() against the given label (depth-first search).

Parameters:

label - the label to find

Returns:

the matching node, or null

repaintTree

public void repaintTree()

Triggers a repaint on the tree (e.g., after external state changes that affect the cell renderer).

createDefaultPopupMenu

public JPopupMenu createDefaultPopupMenu()

Creates the default popup menu with generic tree navigation actions: Deselect All, Uncheck All, Collapse/Expand All, Collapse/Expand Selected Level, and Auto-select Children toggle. Callers can append tab-specific items to the returned menu before installing it via setPopupMenu(JPopupMenu).

Returns:

a new popup menu with standard tree controls