Package sc.fiji.snt.gui.cmds

Class ComputeSecondaryImg<T extends net.imglib2.type.numeric.RealType<T> & net.imglib2.type.NativeType<T>,U extends net.imglib2.type.numeric.RealType<U> & net.imglib2.type.NativeType<U>>

java.lang.Object

org.scijava.module.AbstractModule

org.scijava.module.DefaultMutableModule

org.scijava.command.DynamicCommand

sc.fiji.snt.gui.cmds.CommonDynamicCmd

sc.fiji.snt.gui.cmds.ComputeSecondaryImg<T,U>

Type Parameters:

T - the pixel type of the input image, extending RealType and NativeType

U - the pixel type of the output (secondary) image, extending RealType and NativeType

All Implemented Interfaces:

Runnable, org.scijava.Cancelable, org.scijava.command.Command, org.scijava.command.Interactive, org.scijava.Contextual, org.scijava.module.Module, org.scijava.module.MutableModule, org.scijava.plugin.SciJavaPlugin, SigmaPaletteListener

public class ComputeSecondaryImg<T extends net.imglib2.type.numeric.RealType<T> & net.imglib2.type.NativeType<T>,U extends net.imglib2.type.numeric.RealType<U> & net.imglib2.type.NativeType<U>>
extends CommonDynamicCmd
implements org.scijava.command.Interactive, SigmaPaletteListener

Implements the "Generate Secondary Layer" command.

Author:

Tiago Ferreira, Cameron Arshadi

Field Summary

Fields inherited from class sc.fiji.snt.gui.cmds.CommonDynamicCmd

EMPTY_LABEL, HEADER_HTML, snt, sntService, statusService, ui, uiService

Fields inherited from class org.scijava.command.DynamicCommand

moduleService, pluginService

Constructor Summary

Constructors

Constructor	Description
ComputeSecondaryImg()

Method Summary

Modifier and Type	Method	Description
protected void	error(String msg)
Window	getParent()
protected void	init()
static void	main(String[] args)
protected void	msg(String msg, String title)
void	paletteDismissed()
void	paletteDisplayed()
protected void	resetUI(boolean validateDimensions)
void	run()
void	setSigmas(List<Double> list)

Methods inherited from class sc.fiji.snt.gui.cmds.CommonDynamicCmd

cancel, cancel, getPromptWithCloseHandler, getPromptWithCloseHandler, init, isCanceled, notifyExternalDataLoaded, notifyLoadingEnd, notifyLoadingStart, resetUI, resetUI, status

Methods inherited from class org.scijava.command.DynamicCommand

context, getCancelReason, getContext, getInfo, getInput, getOutput, saveInputs, setContext, setInput, setOutput, uncancel

Methods inherited from class org.scijava.module.AbstractModule

getDelegateObject, getInputs, getOutputs, initialize, isInputResolved, isOutputResolved, preview, resolveInput, resolveOutput, setInputs, setOutputs, unresolveInput, unresolveOutput

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.scijava.module.Module

getDelegateObject, getInputs, getOutputs, initialize, isInputResolved, isOutputResolved, isResolved, preview, resolveInput, resolveOutput, setInputs, setOutputs, setResolved, unresolveInput, unresolveOutput

Methods inherited from interface org.scijava.module.MutableModule

addInput, addInput, addOutput, addOutput, removeInput, removeOutput

Constructor Details

ComputeSecondaryImg

public ComputeSecondaryImg()

Method Details

init

protected void init()

run

public void run()

Specified by:

run in interface org.scijava.module.MutableModule

Specified by:

run in interface Runnable

Overrides:

run in class CommonDynamicCmd

resetUI

protected void resetUI(boolean validateDimensions)

Overrides:

resetUI in class CommonDynamicCmd

paletteDisplayed

public void paletteDisplayed()

Specified by:

paletteDisplayed in interface SigmaPaletteListener

paletteDismissed

public void paletteDismissed()

Specified by:

paletteDismissed in interface SigmaPaletteListener

getParent

public Window getParent()

Specified by:

getParent in interface SigmaPaletteListener

setSigmas

public void setSigmas(List<Double> list)

Specified by:

setSigmas in interface SigmaPaletteListener

msg

protected void msg(String msg,
 String title)

Overrides:

msg in class CommonDynamicCmd

error

protected void error(String msg)

Overrides:

error in class CommonDynamicCmd

main

public static void main(String[] args)