Uses of Package
sc.fiji.snt.seed

Packages that use sc.fiji.snt.seed
Package
Description
SNT core classes
Classes for Seed Tracing.
Automatic neuron tracing algorithms that reconstruct complete neuronal morphologies from images without user interaction.
  • Classes in sc.fiji.snt.seed used by sc.fiji.snt
    Class
    Description
    Transient, in-memory store of SeedPoints used to render candidate tracing seeds (e.g., the output of a deep-learning point detector) on SNT's canvas and to feed them to downstream consumers (autotracers, click-to-trace anchors).
    How SeedOverlayRenderer should pick each seed's LUT slot.
    Immutable candidate seed point used to bootstrap auto-tracing or as a visualization aid for the output of upstream point detectors (e.g., deep-learning probability maps + local-max suppression).
  • Class
    Description
    Transient, in-memory store of SeedPoints used to render candidate tracing seeds (e.g., the output of a deep-learning point detector) on SNT's canvas and to feed them to downstream consumers (autotracers, click-to-trace anchors).
    How SeedOverlayRenderer should pick each seed's LUT slot.
    Listener fired on any change to the overlay (add/clear/threshold/visibility).
    Immutable candidate seed point used to bootstrap auto-tracing or as a visualization aid for the output of upstream point detectors (e.g., deep-learning probability maps + local-max suppression).
    TableModel backed by a SeedOverlay.
  • Class
    Description
    Immutable candidate seed point used to bootstrap auto-tracing or as a visualization aid for the output of upstream point detectors (e.g., deep-learning probability maps + local-max suppression).