Uses of Interface
sc.fiji.snt.tracing.auto.AutoTracer

Packages that use AutoTracer
Package
Description
Automatic neuron tracing algorithms that reconstruct complete neuronal morphologies from images without user interaction.
  • Uses of AutoTracer in sc.fiji.snt.tracing.auto

    Classes in sc.fiji.snt.tracing.auto that implement AutoTracer
    Modifier and Type
    Class
    Description
    class 
    Abstract base class for grayscale-based automatic neuron tracers.
    class 
    AbstractGWDTTracer<T extends net.imglib2.type.numeric.RealType<T>>
    Abstract base class for GWDT-based tracers: APP2-style neuron tracer using Gray-Weighted Distance Transform and Fast Marching.
    class 
    Class for generation of Trees from a skeletonized image.
    class 
    DiskBackedGWDTTracer<T extends net.imglib2.type.numeric.RealType<T>>
    Disk-backed GWDT tracer for very large images.
    class 
    GWDTTracer<T extends net.imglib2.type.numeric.RealType<T>>
    In-memory GWDT tracer using array storage.
    class 
    SparseGWDTTracer<T extends net.imglib2.type.numeric.RealType<T>>
    Sparse GWDT tracer using hash map storage for memory efficiency.