Package sc.fiji.snt.tracing.cost

package sc.fiji.snt.tracing.cost

Cost function implementations for classes implementing SearchInterface

Related Packages

Package	Description
sc.fiji.snt.tracing	Path-finding algorithms for interactive neuron tracing.
sc.fiji.snt.tracing.artist	Artist classes provide visual feedback for tracing algorithm execution.
sc.fiji.snt.tracing.auto	Automatic neuron tracing algorithms that reconstruct complete neuronal morphologies from images without user interaction.
sc.fiji.snt.tracing.heuristic	Heuristic implementations for classes implementing SearchInterface
sc.fiji.snt.tracing.image	Data structures used to keep track of encountered nodes during image-based searches for classes implementing SearchInterface

Class	Description
Cost	Interface for cost function implementations used by SearchInterface
Difference	Cost function that computes path cost based on the difference between voxel values and a specified range, useful for tracing along intensity gradients.
DifferenceSq
OneMinusErf	A cost function inspired by an A* search implementation in the Janelia Workstation, where the cost of moving to a new voxel is given by the complementary error function 1 - erf(z), where
Reciprocal	Uses the reciprocal of voxel intensity, rescaled to the interval (double precision) 255 * (intensity - min) / (max - min) to compute the cost of moving to a neighbor node.