Package sc.fiji.snt.util

Class CrossoverFinder.CrossoverEvent

java.lang.Object
sc.fiji.snt.util.CrossoverFinder.CrossoverEvent
Enclosing class:
CrossoverFinder
public static final class CrossoverFinder.CrossoverEvent extends Object
One detected crossover event.

  • Field Summary

    Fields
    Modifier and Type
    Field
    Description
    final Map<Path,IntSummaryStatistics>
    indexWindow
    Min/max of node indices per path near the event
    final double
    medianAngleDeg
    Median crossing angle between local tangents
    final double
    medianMinDist
    Median segment-to-segment closest distance (real world units)
    final Set<Path>
    participants
    Unique paths taking part in the crossover
    final double
    x
    X-coordinate of crossover center in real world units
    final double
    y
    Y-coordinate of crossover center in real world units
    final double
    z
    Z-coordinate of crossover center in real world units

  • Method Summary

    Modifier and Type
    Method
    Description
    String
    toString()
     
    double[]
    xyzct()
    The XYZCT locations (ImagePlus nomenclature with ZCT 1-based indices) of the event center.

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Field Details

    • x

      public final double x
      X-coordinate of crossover center in real world units

    • y

      public final double y
      Y-coordinate of crossover center in real world units

    • z

      public final double z
      Z-coordinate of crossover center in real world units

    • participants

      public final Set<Path> participants
      Unique paths taking part in the crossover

    • medianAngleDeg

      public final double medianAngleDeg
      Median crossing angle between local tangents

    • medianMinDist

      public final double medianMinDist
      Median segment-to-segment closest distance (real world units)

    • indexWindow

      public final Map<Path,IntSummaryStatistics> indexWindow
      Min/max of node indices per path near the event

  • Method Details

    • xyzct

      public double[] xyzct()
      The XYZCT locations (ImagePlus nomenclature with ZCT 1-based indices) of the event center. If participants are associated with multiple channels/frames, their mean position is retrieved.

    • toString

      public String toString()
      Overrides:
      toString in class Object