Uses of Class
sc.fiji.snt.analysis.curation.PlausibilityCheck.LiveCheck

Packages that use PlausibilityCheck.LiveCheck

Package	Description
sc.fiji.snt.analysis.curation	Classes for curation of reconstructions, as implemented by the "Curation Assistant".

Uses of PlausibilityCheck.LiveCheck in sc.fiji.snt.analysis.curation

Subclasses of PlausibilityCheck.LiveCheck in sc.fiji.snt.analysis.curation

Modifier and Type	Class	Description
static class	PlausibilityCheck.BranchAngle	Warns when the bifurcation angle at a fork is outside a plausible range.
static class	PlausibilityCheck.ConstantRadii	Warns when a path has radii assigned, but they are all identical (likely unfitted defaults).
static class	PlausibilityCheck.DirectionContinuity	Warns when the child path's initial direction deviates sharply from the parent's tangent at the branch point (potential U-turn).
static class	PlausibilityCheck.InterForkDistance	Warns when two consecutive forks on the same parent path are implausibly close together.
static class	PlausibilityCheck.RadiusContinuity	Warns when the child neurite's radius at the fork point exceeds the parent's radius at the branch point.
static class	PlausibilityCheck.SomaDistance	Warns when a primary path starts far from any soma node.
static class	PlausibilityCheck.TerminalBranchLength	Warns when a terminal path is suspiciously short.
static class	PlausibilityCheck.TortuosityConsistency	Warns when child and parent have very different tortuosity (contraction).

Methods in sc.fiji.snt.analysis.curation with type parameters of type PlausibilityCheck.LiveCheck

Modifier and Type	Method	Description
<T extends PlausibilityCheck.LiveCheck> T	PlausibilityMonitor.getLiveCheck(Class<T> type)	Convenience method to get a specific live check by type.

Methods in sc.fiji.snt.analysis.curation that return types with arguments of type PlausibilityCheck.LiveCheck

Modifier and Type	Method	Description
List<PlausibilityCheck.LiveCheck>	PlausibilityMonitor.getLiveChecks()

Methods in sc.fiji.snt.analysis.curation with parameters of type PlausibilityCheck.LiveCheck

Modifier and Type	Method	Description
PlausibilityCheck.Measurements	PlausibilityMonitor.measure(PlausibilityCheck.LiveCheck liveCheck, Collection<Path> paths)	Collects the raw distribution of liveCheck's metric across paths without applying its warning threshold.