InsectBrainUtils (SNT 5.0.12-SNAPSHOT API)

java.lang.Object

sc.fiji.snt.annotation.InsectBrainUtils

public final class InsectBrainUtils extends Object

Utility methods for retrieving species, brain, and neuron data from the Insect Brain Database

Author:: Cameron Arshadi, Tiago Ferreira

Method Summary

Modifier and Type

Method

Description

static List<Integer>

getAllNeuronIDs()

protected static Map<String,List<Integer>>

getAllNeuronIDsOrganizedBySpecies()

static List<Map<String,Object>>

getAllSpecies()

static List<InsectBrainCompartment>

getBrainCompartments(int speciesId, String sex)

static org.json.JSONObject

getBrainJSON(int speciesId)

static List<OBJMesh>

getBrainMeshes(int speciesId, String sex)

static List<Integer>

getSpeciesNeuronIDs(int speciesId)

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Details
- getAllSpecies
  
  public static List<Map<String,Object>> getAllSpecies()
- getAllNeuronIDsOrganizedBySpecies
  
  protected static Map<String,List<Integer>> getAllNeuronIDsOrganizedBySpecies()
- getAllNeuronIDs
  
  public static List<Integer> getAllNeuronIDs()
- getSpeciesNeuronIDs
  
  public static List<Integer> getSpeciesNeuronIDs(int speciesId)
- getBrainJSON
  
  public static org.json.JSONObject getBrainJSON(int speciesId)
- getBrainCompartments
  
  public static List<InsectBrainCompartment> getBrainCompartments(int speciesId, String sex)
- getBrainMeshes
  
  public static List<OBJMesh> getBrainMeshes(int speciesId, String sex)