Package sc.fiji.snt.io

Class SpimDataUtils.N5Sources

java.lang.Object

sc.fiji.snt.io.SpimDataUtils.N5Sources

Enclosing class:

SpimDataUtils

public static class SpimDataUtils.N5Sources
extends Object

Holds the sources produced by opening an N5 or OME-Zarr container via n5-ij/n5-universe/n5-viewer_fiji (see SpimDataUtils.resolvePathToSource(String)). Unlike AbstractSpimData, there is no BDV-XML descriptor involved: sources are built directly from the container's own N5/OME-NGFF metadata via N5Viewer.buildN5Sources(org.janelia.saalfeldlab.n5.N5Reader, org.janelia.saalfeldlab.n5.ui.DataSelection, bdv.cache.SharedQueue, java.util.List<bdv.tools.brightness.ConverterSetup>, java.util.List<bdv.viewer.SourceAndConverter<T>>, bdv.util.BdvOptions).

Field Summary

Fields

Modifier and Type	Field	Description
final String	name	Display name derived from the container's directory name.
final int	numTimepoints	Number of timepoints shared by all sources.
final List<bdv.viewer.SourceAndConverter<?>>	sources	One SourceAndConverter per channel/setup, in discovery order.

Constructor Summary

Constructors

Constructor	Description
N5Sources(List<bdv.viewer.SourceAndConverter<?>> sources, int numTimepoints, String name)

Method Summary

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

sources

public final List<bdv.viewer.SourceAndConverter<?>> sources

One SourceAndConverter per channel/setup, in discovery order.

numTimepoints

public final int numTimepoints

Number of timepoints shared by all sources.

name

public final String name

Display name derived from the container's directory name.

Constructor Details

N5Sources

public N5Sources(List<bdv.viewer.SourceAndConverter<?>> sources,
 int numTimepoints,
 String name)