Package sc.fiji.snt.viewer.geditor

Class SNTPseudographAdapter<V,E extends org.jgrapht.graph.DefaultWeightedEdge>

java.lang.Object
com.mxgraph.util.mxEventSource
com.mxgraph.view.mxGraph
org.jgrapht.ext.JGraphXAdapter<V,E>
sc.fiji.snt.viewer.geditor.SNTGraphAdapter<V,E>
sc.fiji.snt.viewer.geditor.SNTPseudographAdapter<V,E>
All Implemented Interfaces:
EventListener, org.jgrapht.event.GraphListener<V,E>, org.jgrapht.event.VertexSetListener<V>
public class SNTPseudographAdapter<V,E extends org.jgrapht.graph.DefaultWeightedEdge> extends SNTGraphAdapter<V,E>
JGraphX adapter for visualizing SNT pseudographs (graphs allowing self-loops and multiple edges). Extends SNTGraphAdapter to handle styling and color management specific to pseudograph structures.

  • Nested Class Summary

    Nested classes/interfaces inherited from class com.mxgraph.view.mxGraph

    com.mxgraph.view.mxGraph.mxICellVisitor

    Nested classes/interfaces inherited from class com.mxgraph.util.mxEventSource

    com.mxgraph.util.mxEventSource.mxIEventListener

  • Field Summary

    Fields inherited from class sc.fiji.snt.viewer.geditor.SNTGraphAdapter

    cGraph

    Fields inherited from class com.mxgraph.view.mxGraph

    allowDanglingEdges, allowLoops, allowNegativeCoordinates, alternateEdgeStyle, autoOrigin, autoSizeCells, border, cellsBendable, cellsCloneable, cellsDeletable, cellsDisconnectable, cellsEditable, cellsLocked, cellsMovable, cellsResizable, cellsSelectable, changesRepaintThreshold, changeSupport, cloneInvalidEdges, collapseToPreferredSize, connectableEdges, constrainChildren, defaultLoopStyle, defaultOverlap, defaultParent, disconnectOnMove, dropEnabled, edgeLabelsMovable, enabled, extendParents, extendParentsOnAdd, fullRepaintHandler, graphModelChangeHandler, gridEnabled, gridSize, htmlLabels, imageBundles, keepEdgesInBackground, keepEdgesInForeground, labelsClipped, labelsVisible, maximumGraphBounds, minimumGraphSize, model, multigraph, multiplicities, origin, portsEnabled, resetEdgesOnConnect, resetEdgesOnMove, resetEdgesOnResize, resetViewOnRootChange, selectionModel, splitEnabled, stylesheet, swimlaneNesting, updateOriginHandler, VERSION, vertexLabelsMovable, view

    Fields inherited from class com.mxgraph.util.mxEventSource

    eventListeners, eventsEnabled, eventSource

  • Constructor Summary

    Constructors
    Constructor
    Description
    SNTPseudographAdapter(SNTPseudograph<V,E> graph)
     

  • Method Summary

    Modifier and Type
    Method
    Description
    String
    convertValueToString(Object cell)
     
    void
    setEdgeColor(E edge, org.scijava.util.ColorRGB color)
     
    void
    setVertexColor(V vertex, org.scijava.util.ColorRGB color)
     

    Methods inherited from class sc.fiji.snt.viewer.geditor.SNTGraphAdapter

    cellLabelChanged, getOriginalValueOfmxCell, getSourceGraph, isEdgeLabelsEnabled, isVertexLabelsEnabled, scaleEdgeWidths, setCellColorsFromGraph, setEnableEdgeLabels, setEnableVertexLabels

    Methods inherited from class org.jgrapht.ext.JGraphXAdapter

    edgeAdded, edgeRemoved, getCellToEdgeMap, getCellToVertexMap, getEdgeToCellMap, getVertexToCellMap, vertexAdded, vertexRemoved

    Methods inherited from class com.mxgraph.view.mxGraph

    addAllEdges, addCell, addCell, addCell, addCells, addCells, addCells, addCells, addEdge, addImageBundle, addPropertyChangeListener, addPropertyChangeListener, addSelectionCell, addSelectionCells, addTopmostVerticesAndEdges, alignCells, alignCells, alignCells, cellConnected, cellDrawn, cellsAdded, cellsAdded, cellsFolded, cellsFolded, cellSizeUpdated, cellsMoved, cellsOrdered, cellsRemoved, cellsResized, cellsToggled, clearSelection, cloneCells, cloneCells, connectCell, connectCell, constrainChild, createEdge, createGraphView, createGroupCell, createSelectionModel, createStylesheet, createVertex, createVertex, disconnectGraph, drawCell, drawGraph, drawState, enterGroup, enterGroup, exitGroup, extendParent, findTreeRoots, findTreeRoots, findTreeRoots, flipEdge, foldCells, foldCells, foldCells, foldCells, getAllConnectionConstraints, getAllEdges, getAlternateEdgeStyle, getBorder, getBoundingBox, getBoundingBox, getBoundingBox, getBoundingBoxFromGeometry, getBoundsForCells, getBoundsForGroup, getCellBounds, getCellBounds, getCellBounds, getCellBounds, getCellContainmentArea, getCellGeometry, getCellsBeyond, getCellsForGroup, getCellStyle, getCellValidationError, getChangesRepaintThreshold, getChildCells, getChildCells, getChildEdges, getChildOffsetForCell, getChildVertices, getCloneableCells, getConnectionConstraint, getConnectionPoint, getConnections, getConnections, getConnections, getCurrentRoot, getDefaultLoopStyle, getDefaultOverlap, getDefaultParent, getDeletableCells, getDropTarget, getEdges, getEdges, getEdges, getEdges, getEdgesBetween, getEdgesBetween, getEdgeValidationError, getFoldableCells, getGraphBounds, getGridSize, getImage, getImageBundles, getImageBundles, getImageFromBundles, getIncomingEdges, getIncomingEdges, getLabel, getLinkForCell, getMaximumGraphBounds, getMinimumGraphSize, getModel, getMovableCells, getMultiplicities, getOpposites, getOpposites, getOrigin, getOutgoingEdges, getOutgoingEdges, getOverlap, getPaintBounds, getPreferredSizeForCell, getSelectionCell, getSelectionCells, getSelectionCellsForChanges, getSelectionCount, getSelectionModel, getStartSize, getStylesheet, getTargetForCell, getTerminalForPort, getToolTipForCell, getTranslateForRoot, getView, graphModelChanged, groupCells, groupCells, groupCells, groupCells, home, insertEdge, insertEdge, insertVertex, insertVertex, insertVertex, isAllowDanglingEdges, isAllowLoops, isAllowNegativeCoordinates, isAllowOverlapParent, isAutoOrigin, isAutoSizeCell, isAutoSizeCells, isCellBendable, isCellCloneable, isCellCollapsed, isCellConnectable, isCellDeletable, isCellDisconnectable, isCellEditable, isCellFoldable, isCellLocked, isCellMovable, isCellResizable, isCellsBendable, isCellsCloneable, isCellsDeletable, isCellsDisconnectable, isCellsEditable, isCellSelectable, isCellSelected, isCellsLocked, isCellsMovable, isCellsResizable, isCellsSelectable, isCellVisible, isCloneInvalidEdges, isCollapseToPreferredSize, isConnectableEdges, isConstrainChild, isConstrainChildren, isDisconnectOnMove, isDropEnabled, isEdgeLabelsMovable, isEdgeValid, isEnabled, isExtendParent, isExtendParents, isExtendParentsOnAdd, isGridEnabled, isHtmlLabel, isHtmlLabels, isKeepEdgesInBackground, isKeepEdgesInForeground, isLabelClipped, isLabelMovable, isLabelsClipped, isLabelsVisible, isLoop, isMultigraph, isOrthogonal, isPort, isPortsEnabled, isResetEdgesOnConnect, isResetEdgesOnMove, isResetEdgesOnResize, isResetViewOnRootChange, isSelectionEmpty, isSplitEnabled, isSplitTarget, isSwimlane, isSwimlaneNesting, isTerminalPointMovable, isValidAncestor, isValidConnection, isValidDropTarget, isValidRoot, isValidSource, isValidTarget, isVertexLabelsMovable, main, moveCells, moveCells, moveCells, orderCells, orderCells, postProcessCellStyle, processChange, processChanges, refresh, removeCells, removeCells, removeCells, removeCellsFromParent, removeCellsFromParent, removeImageBundle, removePropertyChangeListener, removePropertyChangeListener, removeSelectionCell, removeSelectionCells, removeStateForCell, repaint, repaint, resetEdge, resetEdges, resizeCell, resizeCells, selectAll, selectAll, selectCell, selectCells, selectCells, selectChildCell, selectEdges, selectEdges, selectNextCell, selectParentCell, selectPreviousCell, selectVertices, selectVertices, setAllowDanglingEdges, setAllowLoops, setAllowNegativeCoordinates, setAlternateEdgeStyle, setAutoOrigin, setAutoSizeCells, setBorder, setCellsBendable, setCellsCloneable, setCellsDeletable, setCellsDisconnectable, setCellsEditable, setCellsLocked, setCellsMovable, setCellsResizable, setCellsSelectable, setCellStyle, setCellStyle, setCellStyleFlags, setCellStyleFlags, setCellStyles, setCellStyles, setChangesRepaintThreshold, setCloneInvalidEdges, setCollapseToPreferredSize, setConnectableEdges, setConnectionConstraint, setConstrainChildren, setDefaultLoopStyle, setDefaultOverlap, setDefaultParent, setDisconnectOnMove, setDropEnabled, setEdgeLabelsMovable, setEnabled, setExtendParents, setExtendParentsOnAdd, setGridEnabled, setGridSize, setHtmlLabels, setKeepEdgesInBackground, setKeepEdgesInForeground, setLabelsClipped, setLabelsVisible, setMaximumGraphBounds, setMinimumGraphSize, setModel, setMultigraph, setMultiplicities, setOrigin, setPortsEnabled, setResetEdgesOnConnect, setResetEdgesOnMove, setResetEdgesOnResize, setResetViewOnRootChange, setSelectionCell, setSelectionCells, setSelectionCells, setSplitEnabled, setStylesheet, setSwimlaneNesting, setVertexLabelsMovable, setView, snap, splitEdge, splitEdge, splitEdge, swapBounds, toggleCells, toggleCells, toggleCells, toggleCellStyle, toggleCellStyleFlags, toggleCellStyleFlags, toggleCellStyles, toggleCellStyles, toString, translateCell, traverse, traverse, ungroupCells, ungroupCells, updateAlternateBounds, updateCellSize, updateCellSize, updateGroupBounds, updateGroupBounds, updateGroupBounds, updateGroupBounds, updateOrigin, updateSelection, validateCell, validateEdge

    Methods inherited from class com.mxgraph.util.mxEventSource

    addListener, fireEvent, fireEvent, getEventSource, isEventsEnabled, removeListener, removeListener, setEventsEnabled, setEventSource

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

    Methods inherited from interface org.jgrapht.event.GraphListener

    edgeWeightUpdated

  • Constructor Details

    • SNTPseudographAdapter

      public SNTPseudographAdapter(SNTPseudograph<V,E> graph)

  • Method Details

    • setVertexColor

      public void setVertexColor(V vertex, org.scijava.util.ColorRGB color)
      Overrides:
      setVertexColor in class SNTGraphAdapter<V,E extends org.jgrapht.graph.DefaultWeightedEdge>

    • setEdgeColor

      public void setEdgeColor(E edge, org.scijava.util.ColorRGB color)
      Overrides:
      setEdgeColor in class SNTGraphAdapter<V,E extends org.jgrapht.graph.DefaultWeightedEdge>

    • convertValueToString

      public String convertValueToString(Object cell)
      Overrides:
      convertValueToString in class com.mxgraph.view.mxGraph