Package sc.fiji.snt.viewer.geditor

Class TreeGraphComponent

java.lang.Object

java.awt.Component

java.awt.Container

javax.swing.JComponent

javax.swing.JScrollPane

com.mxgraph.swing.mxGraphComponent

sc.fiji.snt.viewer.geditor.SNTGraphComponent

sc.fiji.snt.viewer.geditor.TreeGraphComponent

All Implemented Interfaces:

ImageObserver, MenuContainer, Printable, Serializable, Accessible, ScrollPaneConstants

public class TreeGraphComponent
extends SNTGraphComponent

JGraphX visualization component for tree graphs representing neurite morphologies. Extends SNTGraphComponent with compact tree layout for hierarchical display of SWC reconstructions.

See Also:

• Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class com.mxgraph.swing.mxGraphComponent

com.mxgraph.swing.mxGraphComponent.mxGraphControl, com.mxgraph.swing.mxGraphComponent.mxMouseRedirector

Nested classes/interfaces inherited from class javax.swing.JScrollPane

JScrollPane.AccessibleJScrollPane, JScrollPane.ScrollBar

Nested classes/interfaces inherited from class javax.swing.JComponent

JComponent.AccessibleJComponent

Nested classes/interfaces inherited from class java.awt.Container

Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

Component.AccessibleAWTComponent, Component.BaselineResizeBehavior, Component.BltBufferStrategy, Component.FlipBufferStrategy

Field Summary

Fields inherited from class sc.fiji.snt.viewer.geditor.SNTGraphComponent

adapter, cmdService, saveDir

Fields inherited from class com.mxgraph.swing.mxGraphComponent

antiAlias, autoExtend, autoScroll, backgroundImage, canvas, cellEditor, centerPage, centerZoom, collapsedIcon, components, connectionHandler, DEFAULT_COLLAPSED_ICON, DEFAULT_EXPANDED_ICON, DEFAULT_PAGESCALE, DEFAULT_WARNING_ICON, dragEnabled, enterStopsCellEditing, escapeEnabled, eventSource, expandedIcon, exportEnabled, foldingEnabled, graph, graphControl, graphHandler, GRID_STYLE_CROSS, GRID_STYLE_DASHED, GRID_STYLE_DOT, GRID_STYLE_LINE, gridColor, gridStyle, gridVisible, horizontalPageCount, importEnabled, invokesStopCellEditing, keepSelectionVisibleOnZoom, overlays, pageBackgroundColor, pageBorderColor, pageBreakColor, pageBreaksVisible, pageFormat, pageScale, pageShadowColor, pageVisible, panningHandler, preferPageSize, previewAlpha, repaintHandler, scaleHandler, selectionCellsHandler, showDirtyRectangle, swimlaneSelectionEnabled, textAntiAlias, tolerance, transparentSwimlaneContent, tripleBuffer, tripleBuffered, tripleBufferGraphics, updateHandler, verticalPageCount, viewChangeHandler, warningIcon, ZOOM_POLICY_NONE, ZOOM_POLICY_PAGE, ZOOM_POLICY_WIDTH, zoomFactor, zoomPolicy

Fields inherited from class javax.swing.JScrollPane

columnHeader, horizontalScrollBar, horizontalScrollBarPolicy, lowerLeft, lowerRight, rowHeader, upperLeft, upperRight, verticalScrollBar, verticalScrollBarPolicy, viewport

Fields inherited from class javax.swing.JComponent

listenerList, TOOL_TIP_TEXT_KEY, ui, UNDEFINED_CONDITION, WHEN_ANCESTOR_OF_FOCUSED_COMPONENT, WHEN_FOCUSED, WHEN_IN_FOCUSED_WINDOW

Fields inherited from class java.awt.Component

accessibleContext, BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Fields inherited from interface java.awt.print.Printable

NO_SUCH_PAGE, PAGE_EXISTS

Fields inherited from interface javax.swing.ScrollPaneConstants

COLUMN_HEADER, HORIZONTAL_SCROLLBAR, HORIZONTAL_SCROLLBAR_ALWAYS, HORIZONTAL_SCROLLBAR_AS_NEEDED, HORIZONTAL_SCROLLBAR_NEVER, HORIZONTAL_SCROLLBAR_POLICY, LOWER_LEADING_CORNER, LOWER_LEFT_CORNER, LOWER_RIGHT_CORNER, LOWER_TRAILING_CORNER, ROW_HEADER, UPPER_LEADING_CORNER, UPPER_LEFT_CORNER, UPPER_RIGHT_CORNER, UPPER_TRAILING_CORNER, VERTICAL_SCROLLBAR, VERTICAL_SCROLLBAR_ALWAYS, VERTICAL_SCROLLBAR_AS_NEEDED, VERTICAL_SCROLLBAR_NEVER, VERTICAL_SCROLLBAR_POLICY, VIEWPORT

Constructor Summary

Constructors

Constructor	Description
TreeGraphComponent(TreeGraphAdapter adapter, org.scijava.Context context)

Method Summary

Modifier and Type	Method	Description
protected void	flipGraphToHorizontal(boolean horizontal)

Methods inherited from class sc.fiji.snt.viewer.geditor.SNTGraphComponent

assignEditor, centerGraph, export, exportDocument, getPreferredSize, getSaveDir, isPanningEvent, refresh, replaceGraph

Methods inherited from class com.mxgraph.swing.mxGraphComponent

addCellOverlay, addListener, canExportCell, canImportCell, checkTripleBuffer, clearCellOverlays, clearCellOverlays, createCanvas, createCellEditor, createComponents, createConnectionHandler, createGraphControl, createGraphHandler, createHandler, createHandlers, createPanningHandler, createSelectionCellsHandler, createTransferHandler, createTripleBuffer, destroyTripleBuffer, escape, getBackgroundImage, getCanvas, getCellAt, getCellAt, getCellAt, getCellEditor, getCellOverlays, getCells, getCells, getConnectionHandler, getEditingValue, getExportableCells, getFoldingIcon, getFoldingIconBounds, getGraph, getGraphControl, getGraphHandler, getGridColor, getGridStyle, getHorizontalPageBorder, getHorizontalPageCount, getImportableCells, getLayoutAreaSize, getPageBackgroundColor, getPageBorderColor, getPageBreakColor, getPageFormat, getPageScale, getPageShadowColor, getPageTranslate, getPanningHandler, getPointForEvent, getPointForEvent, getPreferredSizeForPage, getPreviewAlpha, getScaledPreferredSizeForGraph, getSelectionCellsHandler, getTolerance, getTripleBuffer, getVerticalPageBorder, getVerticalPageCount, getZoomFactor, getZoomPolicy, hitFoldingIcon, importCells, insertComponent, installDoubleClickHandler, installFocusHandler, installKeyHandler, installResizeHandler, isAntiAlias, isAutoExtend, isAutoScroll, isCenterPage, isCenterZoom, isCloneEvent, isConnectable, isConstrainedEvent, isDragEnabled, isEditEvent, isEditing, isEnterStopsCellEditing, isEscapeEnabled, isEventsEnabled, isExportEnabled, isFoldingEnabled, isForceMarqueeEvent, isForceTripleBuffered, isGridEnabledEvent, isGridVisible, isImportEnabled, isInvokesStopCellEditing, isKeepSelectionVisibleOnZoom, isPageBreaksVisible, isPageVisible, isPanning, isPreferPageSize, isSignificant, isSwimlaneSelectionEnabled, isTextAntiAlias, isToggleEvent, isTripleBuffered, labelChanged, maintainScrollBar, paintBackground, paintBackgroundImage, paintBackgroundPage, paintGrid, print, redraw, removeAllComponents, removeAllOverlays, removeCellOverlay, removeCellOverlayComponent, removeCellOverlays, removeComponent, removeListener, removeListener, repaintTripleBuffer, scrollCellToVisible, scrollCellToVisible, scrollToCenter, selectCellForEvent, selectCellsForEvent, selectRegion, setAntiAlias, setAutoExtend, setAutoScroll, setBackgroundImage, setCellEditor, setCellWarning, setCellWarning, setCellWarning, setCenterPage, setCenterZoom, setConnectable, setDragEnabled, setEnterStopsCellEditing, setEscapeEnabled, setEventsEnabled, setExportEnabled, setFoldingEnabled, setGraph, setGridColor, setGridStyle, setGridVisible, setHorizontalPageCount, setImportEnabled, setInvokesStopCellEditing, setKeepSelectionVisibleOnZoom, setPageBackgroundColor, setPageBorderColor, setPageBreakColor, setPageBreaksVisible, setPageFormat, setPageScale, setPageShadowColor, setPageVisible, setPanning, setPreferPageSize, setPreviewAlpha, setSwimlaneSelectionEnabled, setTextAntiAlias, setTolerance, setToolTips, setTripleBuffered, setVerticalPageCount, setZoomFactor, setZoomPolicy, snapScaledPoint, snapScaledPoint, startEditing, startEditingAtCell, startEditingAtCell, stopEditing, updateCellOverlayComponent, updateCellOverlays, updateComponent, updateComponents, updateComponents, validateGraph, validateGraph, zoom, zoom, zoomActual, zoomAndCenter, zoomIn, zoomOut, zoomTo

Methods inherited from class javax.swing.JScrollPane

createHorizontalScrollBar, createVerticalScrollBar, createViewport, getAccessibleContext, getColumnHeader, getCorner, getHorizontalScrollBar, getHorizontalScrollBarPolicy, getRowHeader, getUI, getUIClassID, getVerticalScrollBar, getVerticalScrollBarPolicy, getViewport, getViewportBorder, getViewportBorderBounds, isValidateRoot, isWheelScrollingEnabled, paramString, setColumnHeader, setColumnHeaderView, setComponentOrientation, setCorner, setHorizontalScrollBar, setHorizontalScrollBarPolicy, setLayout, setRowHeader, setRowHeaderView, setUI, setVerticalScrollBar, setVerticalScrollBarPolicy, setViewport, setViewportBorder, setViewportView, setWheelScrollingEnabled, updateUI

Methods inherited from class javax.swing.JComponent

addAncestorListener, addNotify, addVetoableChangeListener, computeVisibleRect, contains, createToolTip, disable, enable, firePropertyChange, firePropertyChange, firePropertyChange, fireVetoableChange, getActionForKeyStroke, getActionMap, getAlignmentX, getAlignmentY, getAncestorListeners, getAutoscrolls, getBaseline, getBaselineResizeBehavior, getBorder, getBounds, getClientProperty, getComponentGraphics, getComponentPopupMenu, getConditionForKeyStroke, getDebugGraphicsOptions, getDefaultLocale, getFontMetrics, getGraphics, getHeight, getInheritsPopupMenu, getInputMap, getInputMap, getInputVerifier, getInsets, getInsets, getListeners, getLocation, getMaximumSize, getMinimumSize, getNextFocusableComponent, getPopupLocation, getRegisteredKeyStrokes, getRootPane, getSize, getToolTipLocation, getToolTipText, getToolTipText, getTopLevelAncestor, getTransferHandler, getVerifyInputWhenFocusTarget, getVetoableChangeListeners, getVisibleRect, getWidth, getX, getY, grabFocus, hide, isDoubleBuffered, isLightweightComponent, isManagingFocus, isOpaque, isOptimizedDrawingEnabled, isPaintingForPrint, isPaintingOrigin, isPaintingTile, isRequestFocusEnabled, paint, paintBorder, paintChildren, paintComponent, paintImmediately, paintImmediately, print, printAll, printBorder, printChildren, printComponent, processComponentKeyEvent, processKeyBinding, processKeyEvent, processMouseEvent, processMouseMotionEvent, putClientProperty, registerKeyboardAction, registerKeyboardAction, removeAncestorListener, removeNotify, removeVetoableChangeListener, repaint, repaint, requestDefaultFocus, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resetKeyboardActions, reshape, revalidate, scrollRectToVisible, setActionMap, setAlignmentX, setAlignmentY, setAutoscrolls, setBackground, setBorder, setComponentPopupMenu, setDebugGraphicsOptions, setDefaultLocale, setDoubleBuffered, setEnabled, setFocusTraversalKeys, setFont, setForeground, setInheritsPopupMenu, setInputMap, setInputVerifier, setMaximumSize, setMinimumSize, setNextFocusableComponent, setOpaque, setPreferredSize, setRequestFocusEnabled, setToolTipText, setTransferHandler, setUI, setVerifyInputWhenFocusTarget, setVisible, unregisterKeyboardAction, update

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, addPropertyChangeListener, addPropertyChangeListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalKeys, getFocusTraversalPolicy, getLayout, getMousePosition, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, printComponents, processContainerEvent, processEvent, remove, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusCycleRoot, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, createImage, createImage, createVolatileImage, createVolatileImage, disableEvents, dispatchEvent, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBackground, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusCycleRootAncestor, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getForeground, getGraphicsConfiguration, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputContext, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocale, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getToolkit, getTreeLock, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isShowing, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, postEvent, prepareImage, prepareImage, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocusInWindow, resize, resize, setBounds, setBounds, setCursor, setDropTarget, setFocusable, setFocusTraversalKeysEnabled, setIgnoreRepaint, setLocale, setLocation, setLocation, setMixingCutoutShape, setName, setSize, setSize, show, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

TreeGraphComponent

public TreeGraphComponent(TreeGraphAdapter adapter,
 org.scijava.Context context)

Method Details

flipGraphToHorizontal

protected void flipGraphToHorizontal(boolean horizontal)