Uses of Interface
sc.fiji.snt.analysis.sholl.math.ShollStats
Packages that use ShollStats
Package
Description
GUI customizations (image overlays, plots, etc.) required for Sholl Analysis.
Statistical analysis of Sholl data
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Uses of ShollStats in sc.fiji.snt.analysis.sholl.gui
Methods in sc.fiji.snt.analysis.sholl.gui that return ShollStatsMethods in sc.fiji.snt.analysis.sholl.gui with parameters of type ShollStatsConstructors in sc.fiji.snt.analysis.sholl.gui with parameters of type ShollStatsModifierConstructorDescriptionShollPlot(String title, String xLabel, String yLabel, ShollStats stats, boolean annotate, boolean useCumulativeFrequencies) ShollPlot(ShollStats stats) ShollPlot(ShollStats stats, boolean cumulativeFrequencies) ShollTable(ShollStats... stats) Instantiates a new table capable of detailing metrics from aLinearProfileStats, aNormalizedProfileStatsinstance or both. -
Uses of ShollStats in sc.fiji.snt.analysis.sholl.math
Classes in sc.fiji.snt.analysis.sholl.math that implement ShollStatsModifier and TypeClassDescriptionclassRetrieves descriptive statistics and calculates Sholl Metrics from sampled Sholl profiles, including those relying on polynomial fitting.classCalculates Sholl Metrics from normalized profiles, including Sholl decay and methods for determination of 'optimal' normalization.classPolarProfileStats computes angle-resolved (‘Polar Sholl’) metrics from a Sholl Profile, providing analysis and visualization methods for directional patterns in Sholl profiles.