Uses of Interface
sc.fiji.snt.analysis.sholl.math.ShollStats

Packages that use ShollStats

Package	Description
sc.fiji.snt.analysis.sholl.gui	GUI customizations (image overlays, plots, etc.) required for Sholl Analysis.
sc.fiji.snt.analysis.sholl.math	Statistical analysis of Sholl data

Uses of ShollStats in sc.fiji.snt.analysis.sholl.gui

Methods in sc.fiji.snt.analysis.sholl.gui that return ShollStats

Modifier and Type	Method	Description
ShollStats	ShollPlot.getStats()

Methods in sc.fiji.snt.analysis.sholl.gui with parameters of type ShollStats

Modifier and Type	Method	Description
void	ShollPlot.rebuild(ShollStats stats)

Constructors in sc.fiji.snt.analysis.sholl.gui with parameters of type ShollStats

Modifier	Constructor	Description
	ShollPlot(String title, String xLabel, String yLabel, ShollStats stats, boolean annotate, boolean useCumulativeFrequencies)
	ShollPlot(ShollStats stats)
	ShollPlot(ShollStats stats, boolean cumulativeFrequencies)
	ShollTable(ShollStats... stats)	Instantiates a new table capable of detailing metrics from a LinearProfileStats, a NormalizedProfileStats instance or both.

Uses of ShollStats in sc.fiji.snt.analysis.sholl.math

Classes in sc.fiji.snt.analysis.sholl.math that implement ShollStats

Modifier and Type	Class	Description
class	LinearProfileStats	Retrieves descriptive statistics and calculates Sholl Metrics from sampled Sholl profiles, including those relying on polynomial fitting.
class	NormalizedProfileStats	Calculates Sholl Metrics from normalized profiles, including Sholl decay and methods for determination of 'optimal' normalization.
class	PolarProfileStats	PolarProfileStats computes angle-resolved (‘Polar Sholl’) metrics from a Sholl Profile, providing analysis and visualization methods for directional patterns in Sholl profiles.