Uses of Package
sc.fiji.snt.tracing.auto

Packages that use sc.fiji.snt.tracing.auto

Package	Description
sc.fiji.snt.gui.cmds	Scijava-based GUIs for SNT built-in commands.
sc.fiji.snt.plugin	SNT add-ons as IJ2 commands
sc.fiji.snt.tracing.auto	Automatic neuron tracing algorithms that reconstruct complete neuronal morphologies from images without user interaction.

Classes in sc.fiji.snt.tracing.auto used by sc.fiji.snt.gui.cmds

Class	Description
AutoTraceConfig	Derives AbstractGWDTTracer configuration parameters from one or more example paths.

Classes in sc.fiji.snt.tracing.auto used by sc.fiji.snt.plugin

Class	Description
AbstractGWDTTracer	Abstract base class for GWDT-based tracers: APP2-style neuron tracer using Gray-Weighted Distance Transform and Fast Marching.
BinaryTracer	Class for generation of Trees from a skeletonized image.

Classes in sc.fiji.snt.tracing.auto used by sc.fiji.snt.tracing.auto

Class	Description
AbstractAutoTracer	Abstract base class for grayscale-based automatic neuron tracers.
AbstractGWDTTracer	Abstract base class for GWDT-based tracers: APP2-style neuron tracer using Gray-Weighted Distance Transform and Fast Marching.
AbstractGWDTTracer.WaypointBiasSource	How the per-waypoint bias amount is derived.
AutoTraceConfig	Derives AbstractGWDTTracer configuration parameters from one or more example paths.
AutoTracer	Interface for automatic neuron tracers that reconstruct complete neuronal morphologies from images.
AutoTracer.SeedRole	Role a SeedPoint plays in a tracing run.
DiskBackedGWDTTracer	Disk-backed GWDT tracer for very large images.
GWDTTracer	In-memory GWDT tracer using array storage.
SomaUtils.SomaResult	Container for soma detection results.
SparseGWDTTracer	Sparse GWDT tracer using hash map storage for memory efficiency.