Package sc.fiji.snt.util

Class ShollPoint

java.lang.Object

sc.fiji.snt.util.PointInImage

sc.fiji.snt.util.ShollPoint

All Implemented Interfaces:

Cloneable, SNTPoint

public class ShollPoint
extends PointInImage

Convenience flavor of PointInImage defining 2D/3D points for Sholl Analysis.

Author:

Tiago Ferreira

Field Summary

Fields inherited from class sc.fiji.snt.util.PointInImage

onPath, radius, v, x, y, z

Constructor Summary

Constructors

Constructor	Description
ShollPoint(double x, double y)
ShollPoint(double x, double y, double z)
ShollPoint(int x, int y, int z, ij.measure.Calibration cal)
ShollPoint(int x, int y, ij.measure.Calibration cal)
ShollPoint(PointInImage pim)

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object object)
static ShollPoint	fromString(String string)
double	rawX(ij.measure.Calibration cal)
double	rawY(ij.measure.Calibration cal)
double	rawZ(ij.measure.Calibration cal)
static void	scale(Collection<ShollPoint> points, ij.measure.Calibration cal)
String	toString()

Methods inherited from class sc.fiji.snt.util.PointInImage

chebyshevDxTo, chebyshevXYdxTo, chebyshevZdxTo, clone, distanceSquaredTo, distanceSquaredTo, distanceTo, euclideanDxTo, getAnnotation, getCoordinateOnAxis, getHemisphere, getPath, getUnscaledPoint, getUnscaledPoint, getX, getY, getZ, hashCode, isReal, isSameLocation, scale, setAnnotation, setHemisphere, setPath, transform

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Details

ShollPoint

public ShollPoint(PointInImage pim)

ShollPoint

public ShollPoint(double x,
 double y,
 double z)

ShollPoint

public ShollPoint(double x,
 double y)

ShollPoint

public ShollPoint(int x,
 int y,
 int z,
 ij.measure.Calibration cal)

ShollPoint

public ShollPoint(int x,
 int y,
 ij.measure.Calibration cal)

Method Details

scale

public static void scale(Collection<ShollPoint> points,
 ij.measure.Calibration cal)

fromString

public static ShollPoint fromString(String string)

rawX

public double rawX(ij.measure.Calibration cal)

rawY

public double rawY(ij.measure.Calibration cal)

rawZ

public double rawZ(ij.measure.Calibration cal)

toString

public String toString()

Overrides:

toString in class PointInImage

equals

public boolean equals(Object object)

Overrides:

equals in class PointInImage