Uses of Package
sc.fiji.snt.analysis.curation
Packages that use sc.fiji.snt.analysis.curation
Package
Description
SNT core classes
Classes for curation of reconstructions, as implemented by the "Curation Assistant".
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Classes in sc.fiji.snt.analysis.curation used by sc.fiji.sntClassDescriptionSeverity levels for plausibility warnings.A plausibility warning produced by a check.Monitors tracing and editing operations for morphological plausibility.Listener interface for warning list changes.
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Classes in sc.fiji.snt.analysis.curation used by sc.fiji.snt.analysis.curationClassDescriptionDefines Which side of the threshold(s) constitutes a flagged value.Four-bucket breakdown returned by
CurationTags.partitionByReviewStatus(Tree).Aggregated calibration results from a set of reference trees.Summary for a single calibrated parameter.A heavier check that scans an entire collection of paths for issues.Classifies how an error propagates through the reconstruction.A lightweight check that evaluates the plausibility of a single fork operation (parent + child + branch index).Full distribution of a check's raw measurements across a reconstruction, collected without applying the warning threshold.Severity levels for plausibility warnings.Assesses local image signal quality around traced paths and flags those in regions with poor contrast.A plausibility warning produced by a check.Monitors tracing and editing operations for morphological plausibility.Listener interface for warning list changes.