Uses of Record Class
sc.fiji.snt.analysis.curation.PlausibilityCheck.Warning

Packages that use PlausibilityCheck.Warning

Package	Description
sc.fiji.snt	SNT core classes
sc.fiji.snt.analysis.curation	Classes for curation of reconstructions, as implemented by the "Curation Assistant".

Uses of PlausibilityCheck.Warning in sc.fiji.snt

Method parameters in sc.fiji.snt with type arguments of type PlausibilityCheck.Warning

Modifier and Type	Method	Description
void	CurationManager.addWarnings(List<PlausibilityCheck.Warning> warnings)	Appends warnings to the table without replacing existing ones.
void	CurationManager.warningsUpdated(List<PlausibilityCheck.Warning> warnings)

Uses of PlausibilityCheck.Warning in sc.fiji.snt.analysis.curation

Methods in sc.fiji.snt.analysis.curation that return types with arguments of type PlausibilityCheck.Warning

Modifier and Type	Method	Description
List<PlausibilityCheck.Warning>	PlausibilityCheck.BranchAngle.check(Path parent, Path child, int branchIndex)
List<PlausibilityCheck.Warning>	PlausibilityCheck.ConstantRadii.check(Path parent, Path child, int branchIndex)
List<PlausibilityCheck.Warning>	PlausibilityCheck.DirectionContinuity.check(Path parent, Path child, int branchIndex)
abstract List<PlausibilityCheck.Warning>	PlausibilityCheck.LiveCheck.check(Path parent, Path child, int branchIndex)	Evaluates the plausibility of a child path forking from a parent.
List<PlausibilityCheck.Warning>	PlausibilityCheck.RadiusContinuity.check(Path parent, Path child, int branchIndex)
List<PlausibilityCheck.Warning>	PlausibilityCheck.SomaDistance.check(Path parent, Path child, int branchIndex)	For this check, parent is ignored: it evaluates whether the child's first node is within range of any soma path.
List<PlausibilityCheck.Warning>	PlausibilityCheck.TerminalBranchLength.check(Path parent, Path child, int branchIndex)
List<PlausibilityCheck.Warning>	PlausibilityCheck.TortuosityConsistency.check(Path parent, Path child, int branchIndex)
List<PlausibilityCheck.Warning>	PlausibilityCheck.SomaDistance.checkDistance(PointInImage start, List<PointInImage> somaNodes)	Evaluates distance from a point to the nearest soma location.
List<PlausibilityCheck.Warning>	PlausibilityMonitor.getCurrentWarnings()
List<PlausibilityCheck.Warning>	PlausibilityMonitor.onNodeEdited(Path editedPath, int nodeIndex)	Hook 4: Node editing. Called after a node is moved, inserted, or deleted during edit mode.
List<PlausibilityCheck.Warning>	PlausibilityMonitor.onPathFinalized(Path completedChild)	Hook 3: Path finalization. Called when the user completes an entire path (SNT.finishPath()).
List<PlausibilityCheck.Warning>	PlausibilityMonitor.onSegmentCompleted(Path candidateChild)	Hook 2: Segment completion. Called from SNT.searchFinished() when A* returns a candidate segment, before the user sees the keep/junk dialog.
List<PlausibilityCheck.Warning>	PlausibilityMonitor.runDeepScan(Collection<Path> paths)	Runs all enabled PlausibilityCheck.DeepChecks against the given paths.
List<PlausibilityCheck.Warning>	PlausibilityMonitor.runFullScan(Collection<Path> paths)	Runs all enabled checks (both live and deep) against the given paths.
abstract List<PlausibilityCheck.Warning>	PlausibilityCheck.DeepCheck.scan(Collection<Path> paths)	Scans a collection of paths for plausibility issues.
List<PlausibilityCheck.Warning>	PlausibilityCheck.PathOverlap.scan(Collection<Path> paths)
List<PlausibilityCheck.Warning>	PlausibilityCheck.RadiusJumps.scan(Collection<Path> paths)
List<PlausibilityCheck.Warning>	PlausibilityCheck.RadiusMonotonicity.scan(Collection<Path> paths)
List<PlausibilityCheck.Warning>	PlausibilityCheck.SignalQuality.scan(Collection<Path> paths)

Methods in sc.fiji.snt.analysis.curation with parameters of type PlausibilityCheck.Warning

Modifier and Type	Method	Description
int	PlausibilityCheck.Warning.compareTo(PlausibilityCheck.Warning other)

Method parameters in sc.fiji.snt.analysis.curation with type arguments of type PlausibilityCheck.Warning

Modifier and Type	Method	Description
void	PlausibilityMonitor.WarningListener.warningsUpdated(List<PlausibilityCheck.Warning> warnings)	Called whenever the monitor's warning list is updated.