Package sc.fiji.snt.analysis.sholl

package sc.fiji.snt.analysis.sholl

Sholl analysis of Images, pre-sampled data and Trees.

Author:

Tiago Ferreira

Related Packages

Package	Description
sc.fiji.snt.analysis	Analysis of Trees.
sc.fiji.snt.analysis.sholl.gui	GUI customizations (image overlays, plots, etc.) required for Sholl Analysis.
sc.fiji.snt.analysis.sholl.math	Statistical analysis of Sholl data
sc.fiji.snt.analysis.sholl.parsers	Parsers to retrieve Sholl profiles from multiple sources (2D/3D images, reconstructions, and tables)
sc.fiji.snt.analysis.curation	Classes for curation of reconstructions, as implemented by the "Curation Assistant".
sc.fiji.snt.analysis.detection	Feature detectors for traced paths.
sc.fiji.snt.analysis.graph	Classes for handling neuronal reconstructions as graphs
sc.fiji.snt.analysis.growth	Classes for growth analysis of neurites across time

Class	Description
Profile	Defines a Sholl profile
ProfileEntry	Utility class defining a Sholl profile entry
ProfileProperties	Associates metadata to a Sholl Profile
ShollUtils	Static utilities.